Negative effects of Euphorbiaceae cultivation on soil nematode communities in tropical soils

Barnes, A.D., Jochum, M., Mumme, S., Haneda, N.F., Farajallah, A., Widarto, T.H., Brose, U., 2014. Consequences of tropical land use for multitrophic biodiversity and ecosystem functioning. Nature Communications 5, 5351.

Article  CAS  Google Scholar 

Barnes, A.D., Weigelt, P., Jochum, M., Ott, D., Hodapp, D., Haneda, N.F., Brose, U., 2016. Species richness and biomass explain spatial turnover in ecosystem functioning across tropical and temperate ecosystems. Philosophical Transactions of the Royal Society B: Biological Sciences 371, 20150279.

Article  Google Scholar 

Beugnon, R., Steinauer, K., Barnes, A.D., Ebeling, A., Roscher, C., Eisenhauer, N., 2019. Plant functional trait identity and diversity effects on soil meso- and macrofauna in an experimental grass-land. Advances in Ecological Research 61, 163–184.

Article  Google Scholar 

Blackman, C.J., Creek, D., Maier, C., Aspinwall, M.J., Drake, J.E., Pfautsch, S., O'Grady, A., Delzon, S., Medlyn, B.E., Tissue, D.T., Choat, B., 2019. Drought response strategies and hydraulic traits contribute to mechanistic understanding of plant dry-down to hydraulic failure. Tree Physiology 39, 910–924.

Article  CAS  Google Scholar 

Bokulich, N.A., Kaehler, B.D., Rideout, J.R., Dillon, M., Bolyen, E., Knight, R., Huttley, G.A., Gregory Caporaso, J., 2018. Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2's q2-feature-classifier plugin. Microbiome 6, 90.

Article  Google Scholar 

Bolyen, E., Rideout, J.R., Dillon, M.R., Bokulich, N.A., Abnet, C.C., Al-Ghalith, G.A., Alexander, H., Alm, E.J., Arumugam, M., Asnicar, F., Bai, Y., Bisanz, J.E., Bittinger, K., Brejnrod, A., Brislawn, C.J., Brown, C.T., Callahan, B.J., Caraballo-Rodríguez, A.M., Chase, J., Cope, E.K., da Silva, R., Diener, C., Dorrestein, P.C., Douglas, G.M., Durall, D.M., Duvallet, C., Edwardson, C.F., Ernst, M., Estaki, M., Fouquier, J., Gauglitz, J.M., Gibbons, S.M., Gibson, D.L., Gonzalez, A., Gorlick, K., Guo, J.R., Hillmann, B., Holmes, S., Holste, H., Huttenhower, C., Huttley, G.A., Janssen, S., Jarmusch, A.K., Jiang, L.J., Kaehler, B.D., Kang, K.B., Keefe, C.R., Keim, P., Kelley, S.T., Knights, D., Koester, I., Kosciólek, T., Kreps, J., Langille, M.G.I., Lee, J., Ley, R., Liu, Y.X., Loftfield, E., Lozupone, C., Maher, M., Marotz, C., Martin, B.D., McDonald, D., McIver, L.J., Melnik, A.V., Metcalf, J.L., Morgan, S.C., Morton, J.T., Naimey, A.T., Navas-Molina, J.A., Nothias, L.F., Orchanian, S.B., Pearson, T., Peoples, S.L., Petráš, D., Preuss, M.L., Pruesse, E., Rasmussen, L.B., Rivers, A., Robeson, M.S., Rosenthal, P., Segata, N., Shaffer, M., Shiffer, A., Sinha, R., Song, S.J., Spear, J.R., Swafford, A.D., Thompson, L.R., Torres, P.J., Trinh, P., Tripathi, A., Turnbaugh, P.J., Ul-Hasan, S., van der Hooft, J.J.J., Vargas, F., Vázquez-Baeza, Y., Vogtmann, E., von Hippel, M., Walters, W., Wan, Y.H., Wang, M.X., Warren, J., Weber, K.C., Williamson, C.H.D., Willis, A.D., Xu, Z.Z., Zaneveld, J.R., Zhang, Y.L., Zhu, Q.Y., Knight, R., Caporaso, J.G., 2019. Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2. Nature Biotechnology 37, 852–857.

Article  CAS  Google Scholar 

Buzhdygan, O.Y., Meyer, S.T., Weisser, W.W., Eisenhauer, N., Ebeling, A., Borrett, S.R., Buchmann, N., Cortois, R., De Deyn, G.B., de Kroon, H., Gleixner, G., Hertzog, L.R., Hines, J., Lange, M., Mommer, L., Ravenek, J., Scherber, C., Scherer-Lorenzen, M., Scheu, S., Schmid, B., Steinauer, K., Strecker, T., Tietjen, B., Vogel, A., Weigelt, A., Petermann, J.S., 2020. Biodiversity increases multitrophic energy use efficiency, flow and storage in grasslands. Nature Ecology & Evolution 4, 393–405.

Article  Google Scholar 

Cao, M., Zou, X.M., Warren, M., Zhu, H., 2006. Tropical forests of Xishuangbanna, China. Biotropica 38, 306–309.

Article  Google Scholar 

Carvalho, C.E., Sfair, J.C., Eller, C.B., Menezes, B.S., Menezes, M.O.T., Araújo, F.S., 2023. Tree height, leaf thickness and seed size drive Caatinga plants' sensitivity to climate change. Journal of Biogeography 50, 2057–2068.

Article  Google Scholar 

Cui, H.W., Liu, X., Chen, S.Y., Liu, Z.Y., Chen, J.W., Zhou, H.K., Xiao, S., Wang, J.J., Song, H.X., Wang, Y.J., Yang, Z., Liu, K., An, L.Z., Nielsen, U.N., 2023. Contrasting responses of nematode composition, richness and biomass to long-term warming. Science of the Total Environment 894, 165074.

Article  CAS  Google Scholar 

Cui, S.Y., Liang, S.W., Zhang, X.K., Li, Y.B., Liang, W.J., Sun, L.J., Wang, J.K., Martijn Bezemer, T., Li, Q., 2018. Long-term fertilization management affects the C utilization from crop residues by the soil micro-food web. Plant and Soil 429, 335–348.

Article  CAS  Google Scholar 

Delgado-Baquerizo, M., Reich, P.B., Trivedi, C., Eldridge, D.J., Abades, S., Alfaro, F.D., Bastida, F., Berhe, A.A., Cutler, N.A., Gallardo, A., García-Velázquez, L., Hart, S.C., Hayes, P.E., He, J.Z., Hseu, Z.Y., Hu, H.W., Kirchmair, M., Neuhauser, S., Pérez, C.A., Reed, S.C., Santos, F., Sullivan, B.W., Trivedi, P., Wang, J.T., Weber-Grullon, L., Williams, M.A., Singh, B.K., 2020. Multiple elements of soil biodiversity drive ecosystem functions across biomes. Nature Ecology & Evolution 4, 210–220.

Article  Google Scholar 

Ferris, H., 2010a. Contribution of nematodes to the structure and function of the soil food web. Journal of Nematology 42, 63–67.

Google Scholar 

Ferris, H., 2010b. Form and function: metabolic footprints of nematodes in the soil food web. European Journal of Soil Biology 46, 97–104.

Article  Google Scholar 

Gauzens, B., Barnes, A., Giling, D.P., Hines, J., Jochum, M., Lefcheck, J.S., Rosenbaum, B., Wang, S.P., Brose, U., 2019. fluxweb: an R package to easily estimate energy fluxes in food webs. Methods in Ecology and Evolution 10, 270–279.

Article  Google Scholar 

Goyal, A.K., Middha, S.K., Usha, T., 2022. Baccaurea ramiflora Lour.: a comprehensive review from traditional usage to pharmacological evidence. Advances in Traditional Medicine 22, 231–249.

Google Scholar 

Han, M.G., Chen, Y., Sun, L.J., Yu, M., Li, R., Li, S.F., Su, J.R., Zhu, B., 2023. Linking rhizosphere soil microbial activity and plant resource acquisition strategy. Journal of Ecology 111, 875–888.

Article  CAS  Google Scholar 

Hu, J.W., Hassi, U., Gebremikael, M.T., Dumack, K., De Swaef, T., Wesemael, W., Sleutel, S., De Neve, S., 2023. Root traits explain multitrophic interactions of belowground microfauna on soil nitrogen mineralization and plant productivity. Soil Biology and Biochemistry 184, 109093.

Article  CAS  Google Scholar 

Kitagami, Y., Suzuki, K., Matsuda, Y., 2024. Effects of tree species identity and soil origin on soil nematode communities and trophic composition in coniferous and broad-leaved forests. Plant and Soil 503, 489–502.

Article  CAS  Google Scholar 

Kõljalg, U., Larsson, K.H., Abarenkov, K., Nilsson, R.H., Alexander, I.J., Eberhardt, U., Erland, S., Høiland, K., Kjøller, R., Larsson, E., Pennanen, T., Sen, R., Taylor, A.F.S., Tedersoo, L., Vrålstad, T., Ursing, B.M., 2005. UNITE: a database providing web-based methods for the molecular identification of ectomycorrhizal fungi. New Phytologist 166, 1063–1068.

Article  Google Scholar 

Laughlin, D.C., 2011. Nitrification is linked to dominant leaf traits rather than functional diversity. Journal of Ecology 99, 1091–1099.

Article  Google Scholar 

Li, G., Liu, T., Whalen, J.K., Wei, Z., 2024. Nematodes: an overlooked tiny engineer of plant health. Trends in Plant Science 29, 52–63.

Article  CAS  Google Scholar 

Liao, X.H., Fu, S.L., Zhao, J., 2023. Altered energy dynamics of multitrophic groups modify the patterns of soil CO2 emissions in planted forest. Soil Biology and Biochemistry 178, 108953.

Article  CAS  Google Scholar 

Liu, Q., Lan, Q.Y., Wen, B., Tan, Y.H., Wang, X.F., 2014. Germination of recalcitrant Baccaurea ramiflora seeds. Scienceasia 40, 101.

Article  CAS  Google Scholar 

Liu, X.T., Liang, S.W., Tian, Y.J., Wang, X., Liang, W.J., Zhang, X.K., 2024. Effect of land use on soil nematode community composition and co-occurrence network relationship. Journal of Integrative Agriculture 23, 2807–2819.

Article  Google Scholar 

Ma, J.H., Wei, X., Liu, S.R., Wu, P.F., 2022. Changes in the soil nematode community among climate zones do not keep pace with changes in plant communities. CATENA 215, 106319.

Article  Google Scholar 

Magaña Ugarte, R., Hurtado Martínez, M., Díaz-Santiago, E., Pugnaire, F.I., 2024. Microbial controls on seed germination. Soil Biology and Biochemistry 199, 109576.

Article  Google Scholar 

Martin, T., Wade, J., Singh, P., Sprunger, C.D., 2022. The integration of nematode communities into the soil biological health framework by factor analysis. Ecological Indicators 136, 108676.

Article  CAS  Google Scholar 

Moche, M., Gutknecht, J., Schulz, E., Langer, U., Rinklebe, J., 2015. Monthly dynamics of microbial community structure and their controlling factors in three floodplain soils. Soil Biology and Biochemistry 90, 169–178.

Article  CAS  Google Scholar 

Morriën, E., Hannula, S.E., Snoek, L.B., Helmsing, N.R., Zweers, H., De Hollander, M., Soto, R.L., Bouffaud, M.L., Buée, M., Dimmers, W., Duyts, H., Geisen, S., Girlanda, M., Griffiths, R.I., Jørgensen, H.B., Jensen, J., Plassart, P., Redecker, D., Schmelz, R.M., Schmidt, O., Thomson, B.C., Tisserant, É., Uroz, S., Winding, A., Bailey, M.J., Bonkowski, M., Faber, J.H., Martin, F., Lemanceau, P., De Boer, W., van Veen, J.A., van der Putten, W.H., 2017. Soil networks become more connected and take up more carbon as nature restoration progresses. Nature Communications 8, 14349.

Article  Google Scholar 

Nisa, R.U., Tantray, A.Y., Kouser, N., Allie, K.A., Wani, S.M., Alamri, S.A., Alyemeni, M.N., Wijaya, L., Shah, A.A., 2021. Influence of ecological and edaphic factors on biodiversity of soil nematodes. Saudi Journal of Biological Sciences 28, 3049–3059.

Article  CAS  Google Scholar 

Oliveira, R.S., Eller, C.B., Barros, F.D.V., Hirota, M., Brum, M., Bittencourt, P., 2021. Linking plant hydraulics and the fast-slow continuum to understand resilience to drought in tropical ecosystems. New Phytologist 230, 904–923.

Article  Google Scholar 

Orwin, K.H., Mason, N.W.H., Aalders, L., Bell, N.L., Schon, N., Mudge, P.L., 2021. Relationships of plant traits and soil biota to soil functions change as nitrogen fertiliser rates increase in an intensively managed agricultural system. Journal of Applied Ecology 58, 392–405.

Article  CAS  Google Scholar 

Osnas, J.L.D., Lichstein, J.W., Reich, P.B., Pacala, S.W., 2013. Global leaf trait relationships: mass, area, and the leaf economics spectrum. Science 340, 741–744.

Article  CAS  Google Scholar 

Pathak, S., Pratap, A., Sharma, R., Jha, M.K., 2024. The Phyllanthus emblica fruits: a review on phytochemistry traditional uses, bioactive composition and pharmacological activities. Current Topics in Medicinal Chemistry 24, 1917–1939.

Article  CAS  Google Scholar 

Paul, M., Catterall, C.P., Pollard, P.C., Kanowski, J., 2010. Recovery of so

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