Three-year cattle manure application does not induce the proliferation of antibiotic resistance genes in vegetable soil

Bao, S.D., 2000. Soil and Agricultural Chemistry Analysis. 3rd ed. Beijing: China Agriculture Press.

Google Scholar 

Bier, R.L., Daniels, M., Oviedo-Vargas, D., Peipoch, M., Price, J.R., Omondi, E., Smith, A., Kan, J.J., 2024. Agricultural soil microbiomes differentiate in soil profiles with fertility source, tillage, and cover crops. Agriculture, Ecosystems & Environment 368, 109002.

Article  CAS  Google Scholar 

Chen, Q.L., An, X.L., Zheng, B.X., Ma, Y.B., Su, J.Q., 2018. Long-term organic fertilization increased antibiotic resistome in phyllosphere of maize. Science of the Total Environment 645, 1230–1237.

Article  CAS  Google Scholar 

Chen, Q.L., Cui, H.L., Su, J.Q., Penuelas, J., Zhu, Y.G., 2019a. Antibiotic resistomes in plant microbiomes. Trends in Plant Science 24, 530–541.

Article  CAS  Google Scholar 

Chen, Z.Y., Zhang, W., Yang, L.X., Stedtfeld, R.D., Peng, A.P., Gu, C., Boyd, S.A., Li, H., 2019b. Antibiotic resistance genes and bacterial communities in cornfield and pasture soils receiving swine and dairy manures. Environmental Pollution 248, 947–957.

Article  CAS  Google Scholar 

Cheng, J.H., Tang, X.Y., Cui, J.F., 2022. Distinct aggregate stratification of antibiotic resistome in farmland soil with long-term manure application. Science of the Total Environment 833, 155088.

Article  CAS  Google Scholar 

Das, S., Jeong, S.T., Das, S., Kim, P.J., 2017. Composted cattle manure increases microbial activity and soil fertility more than composted swine manure in a submerged rice paddy. Frontiers in Microbiology 8, 1702.

Article  Google Scholar 

Dincă, L.C., Grenni, P., Onet, C., Onet, A., 2022. Fertilization and soil microbial community: A review. Applied Sciences 12, 1198.

Article  Google Scholar 

Dong, H., Chen, Y.L., Wang, J., Zhang, Y., Zhang, P., Li, X., Zou, J.X., Zhou, A.G., 2021. Interactions of microplastics and antibiotic resistance genes and their effects on the aquaculture environments. Journal of Hazardous Materials 403, 123961.

Article  CAS  Google Scholar 

Duan, M.L., Gu, J., Wang, X.J., Li, Y., Zhang, S.Q., Yin, Y.N., Zhang, R.R., 2018. Effects of genetically modified cotton stalks on antibiotic resistance genes, intl1, and intl2 during pig manure composting. Ecotoxicology and Environmental Safety 147, 637–642.

Article  CAS  Google Scholar 

Elizabeth, R., Chanda, D.D., Chakravarty, A., Paul, D., Chetri, S., Bhowmik, D., Wangkheimayum, J., Bhattacharjee, A., 2018. Association of glycerol kinase gene with Class 3 integrons: a novel cassette array within Escherichia coli. Indian Journal of Medical Microbiology 36, 104–107.

Article  Google Scholar 

Forsberg, K.J., Patel, S., Gibson, M.K., Lauber, C.L., Knight, R., Fierer, N., Dantas, G., 2014. Bacterial phylogeny structures soil resistomes across habitats. Nature 509, 612–616.

Article  CAS  Google Scholar 

Francioli, D., Schulz, E., Lentendu, G., Wubet, T., Buscot, F., Reitz, T., 2016. Mineral vs. Organic amendments: microbial community structure, activity and abundance of agriculturally relevant microbes are driven by long-term fertilization strategies. Frontiers in Microbiology 7, 1446.

Article  Google Scholar 

Franz, E., van Bruggen, A.H.C., 2008. Ecology of E. coli O157: H7 and Salmonella enterica in the primary vegetable production chain. Critical Reviews in Microbiology 34, 143–161.

Article  Google Scholar 

Gou, C.L., Wang, Y.Q., Zhang, X.Q., Zhong, R.Z., Gao, Y.H., 2021. Effects of chlorotetracycline on antibiotic resistance genes and the bacterial community during cattle manure composting. Bioresource Technology 323, 124517.

Article  CAS  Google Scholar 

Guo, Y.J., Qiu, T.L., Gao, M., Ru, S.H., Gao, H.Z., Wang, X.M., 2023. Does increasing the organic fertilizer application rate always boost the antibiotic resistance level in agricultural soils? Environmental Pollution 322, 121251.

Article  CAS  Google Scholar 

Han, X.M., Hu, H.W., Chen, Q.L., Yang, L.Y., Li, H.L., Zhu, Y.G., Li, X.Z., Ma, Y.B., 2018. Antibiotic resistance genes and associated bacterial communities in agricultural soils amended with different sources of animal manures. Soil Biology and Biochemistry 126, 91–102.

Article  CAS  Google Scholar 

Hatch, D.J., Lovell, R.D., Antil, R.S., Jarvis, S.C., Owen, P.M., 2000. Nitrogen mineralization and microbial activity in permanent pastures amended with nitrogen fertilizer or dung. Biology and Fertility of Soils 30, 288–293.

Article  Google Scholar 

Hazra, M., Watts, J.E.M., Williams, J.B., Joshi, H., 2024. An evaluation of conventional and nature-based technologies for controlling antibiotic-resistant bacteria and antibiotic-resistant genes in wastewater treatment plants. Science of the Total Environment 917, 170433.

Article  CAS  Google Scholar 

He, L.Y., He, L.K., Liu, Y.S., Zhang, M., Zhao, J.L., Zhang, Q.Q., Ying, G.G., 2019. Microbial diversity and antibiotic resistome in swine farm environments. Science of the Total Environment 685, 197–207.

Article  CAS  Google Scholar 

He, Y.W., Yin, X.W., Li, F.H., Wu, B., Zhu, L., Ge, D.B., Wang, N.Y., Chen, A.W., Zhang, L.H., Yan, B.H., Huang, H.L., Luo, L., Wu, G.Y., Zhang, J.C., 2023. Response characteristics of antibiotic resistance genes and bacterial communities during agricultural waste composting: Focusing on biogas residue combined with biochar amendments. Bioresource Technology 372, 128636.

Article  CAS  Google Scholar 

Heuer, H., Solehati, Q., Zimmerling, U., Kleineidam, K., Schloter, M., Müller, T., Focks, A., Thiele-Bruhn, S., Smalla, K., 2011. Accumulation of sulfonamide resistance genes in arable soils due to repeated application of manure containing sulfadiazine. Applied and Environmental Microbiology 77, 2527–2530.

Article  CAS  Google Scholar 

Hu, H.W., Han, X.M., Shi, X.Z., Wang, J.T., Han, L.L., Chen, D.L., He, J.Z., 2016. Temporal changes of antibiotic resistance genes and bacterial communities in two contrasting soils treated with cattle manure. FEMS Microbiology Ecology 92, fiv169.

Article  Google Scholar 

Johnson, T.A., Stedtfeld, R.D., Wang, Q., Cole, J.R., Hashsham, S.A., Looft, T., Zhu, Y.G., Tiedje, J.M., 2016. Clusters of antibiotic resistance genes enriched together stay together in swine agriculture. mBio 7, e02214–15.

Article  CAS  Google Scholar 

Kyselková, M., Kotrbová, L., Bhumibhamon, G., Chroňáková, A., Jirout, J., Vrchotová, N., Schmitt, H., Elhottová, D., 2015. Tetracycline resistance genes persist in soil amended with cattle feces independently from chlortetracycline selection pressure. Soil Biology and Biochemistry 81, 259–265.

Article  Google Scholar 

Larsson, D.G.J., Flach, C.F., 2022. Antibiotic resistance in the environment. Nature Reviews Microbiology 5, 257–269.

Article  Google Scholar 

Lei, L.S., Chen, N., Chen, Z.Y., Zhao, Y.R., Lin, H., Li, X., Hu, W.J., Zhang, H.H., Shi, J.L., Luo, Y., 2024. Dissemination of antibiotic resistance genes from aboveground sources to groundwater in livestock farms. Water Research 256, 121584.

Article  CAS  Google Scholar 

Li, C.H., Zhang, C.X., Tang, L.S., Xiong, Z.Q., Wang, B.Z., Jia, Z.J., Li, Y., 2014. Effect of long-term fertilizing regime on soil microbial diversity and soil property. Acta Microbiologica Sinica 54, 319–329.

CAS  Google Scholar 

Li, H.Y., Zheng, X.Q., Tan, L., Shao, Z.L., Cao, H.Y., Xu, Y., 2022. The vertical migration of antibiotic-resistant genes and pathogens in soil and vegetables after the application of different fertilizers. Environmental Research 203, 111884.

Article  CAS  Google Scholar 

Lin, D., Huang, D., Zhang, J.H., Yao, Y.L., Zhang, G.Q., Ju, F., Xu, B.L., Wang, M.Z., 2022. Reduction of antibiotic resistance genes (ARGs) in swine manure-fertilized soil via fermentation broth from fruit and vegetable waste. Environmental Research 214, 113835.

Article  CAS  Google Scholar 

Liu, Y.R., van der Heijden, M.G.A., Riedo, J., Sanz-Lazaro, C., Eldridge, D.J., Bastida, F., Moreno-Jiménez, E., Zhou, X.Q., Hu, H.W., He, J.Z., Moreno, J.L., Abades, S., Alfaro, F., Bamigboye, A.R., Berdugo, M., Blanco-Pastor, J.L., de los Ríos, A., Duran, J., Grebenc, T., Illán, J.G., Makhalanyane, T.P., Molina-Montenegro, M.A., Nahberger, T.U., Peñaloza-Bojacá, G.F., Plaza, C., Rey, A., Rodríguez, A., Siebe, C., Teixido, A.L., Casado-Coy, N., Trivedi, P., Torres-Díaz, C., Verma, J.P., Mukherjee, A., Zeng, X.M., Wang, L., Wang, J.Y., Zaady, E., Zhou, X.B., Huang, Q.Y., Tan, W.F., Zhu, Y.G., Rillig, M.C., Delgado-Baquerizo, M., 2023a. Publisher Correction: soil contamination in nearby natural areas mirrors that in urban greenspaces worldwide. Nature Communications 14, 2405.

Article  CAS  Google Scholar 

Liu, Z.P., Xie, W.Y., Yang, Z.X., Hu, X.C., Zhang, P.F., Zhou, H.P., 2023b. Effects of long-term application of cattle manure on antibiotic resistome in cinnamon soil. Asian Journal of Ecotoxicology 18, 78–87.

Google Scholar 

McKinney, C.W., Dungan, R.S., Moore, A., Leytem, A.B., 2018. Occurrence and abundance of antibiotic resistance genes in agricultural soil receiving dairy manure. FEMS Microbiology Ecology 94, fiy010.

Article  Google Scholar 

Nikaido, H., Pagès, J.M., 2012. Broad-specificity efflux pumps and their role in multidrug resistance of Gram-negative bacteria. FEMS Microbiology Reviews 36, 340–363.

Article  CAS  Google Scholar 

Nõlvak, H., Truu, M., Kanger, K., Tampere, M., Espenberg, M., Loit, E., Raave, H., Truu, J., 2016. Inorganic and organic fertilizers impact the abundance and proportion of antibiotic resistance and integron-integrase genes in agricultural grassland soil. Science of the Total Environment 562, 678–689.

Article  Google Scholar 

Peng, H.L., Gu, J., Wang, X.J., Wang, Q.Z., Sun, W., Hu, T., Guo, H.H., Ma, J.Y., Bao, J.F., 2020. Insight into the fate of antibiotic resistance genes and bacterial community in co-composting green tea residues with swine manure. Journal of Environmental Management 266, 110581.

Article  CAS  Google Scholar 

Pu, C.J., Yu, Y., Diao, J.X., Gong, X.Y., Li, J., Sun, Y., 2019. Exploring the persistence and spreading of antibiotic resistance from manure to biocompost, soils and vegetables. Science of the Total Environment 688, 262–269.

Article  CAS 

Comments (0)

No login
gif