Abou-Zied OK (2013) Effect of NH2 rotation on the fluorescence of 2-aminopurine in solution. J Photochem Photobiol, A 261:1–6. https://doi.org/10.1016/j.jphotochem.2013.03.007
Álvarez C, Reyes-Sosa FM, Díez B (2016) Enzymatic hydrolysis of biomass from wood. Microb Biotechnol 9(2):149–156. https://doi.org/10.1111/1751-7915.12346
Auxenfans T, Terryn C, Paës G (2017) Seeing biomass recalcitrance through fluorescence. Sci Rep 7(1):8838. https://doi.org/10.1038/s41598-017-08740-1
Baryshnikov G, Minaev B, Ågren H (2017) Theory and calculation of the phosphorescence phenomenon. Chem Rev 117(9):6500–6537. https://doi.org/10.1021/acs.chemrev.7b00060
Berezin MY, Achilefu S (2010) Fluorescence lifetime measurements and biological imaging. Chem Rev 110(5):2641–2684. https://doi.org/10.1021/cr900343z
Birks JB, Dyson DJ, Munro IH (1963) ’Excimer’ fluorescence II. lifetime studies of pyrene solutions. Proc R Soc Lond A. https://doi.org/10.1098/rspa.1963.0187
Breen (2024). CHM 331 Advanced Analytical Chemistry 1. 2024.
Brethauer S, Wyman CE (2010) Review: Continuous hydrolysis and fermentation for cellulosic ethanol production. Biores Technol 101(13):4862–4874. https://doi.org/10.1016/j.biortech.2009.11.009
Brinchi L, Cotana F, Fortunati E, Kenny JM (2013) Production of nanocrystalline cellulose from lignocellulosic biomass: Technology and applications. Carbohyd Polym 94(1):154–169. https://doi.org/10.1016/j.carbpol.2013.01.033
Brown RM Jr, Millard AC, Campagnola PJ (2003) Macromolecular structure of cellulose studied by second-harmonic generation imaging microscopy. Opt Lett 28(22):2207–2209. https://doi.org/10.1364/OL.28.002207
Bücherl CA, Bader A, Westphal AH, Laptenok SP, Borst JW (2014) FRET-FLIM applications in plant systems. Protoplasma 251(2):383–394. https://doi.org/10.1007/s00709-013-0595-7
Caesar K, Elgass K, Chen Z, Huppenberger P, Witthöft J, Schleifenbaum F, Blatt MR, Oecking C, Harter K (2011) A fast brassinolide-regulated response pathway in the plasma membrane of Arabidopsis thaliana. Plant J 66(3):528–540. https://doi.org/10.1111/j.1365-313X.2011.04510.x
Cao R, Wallrabe HK, Periasamy A (2020) Multiphoton FLIM imaging of NAD(P)H and FAD with one excitation wavelength. J Biomed Opt 25(1):014510. https://doi.org/10.1117/1.JBO.25.1.014510
Carlon-Andres I, Padilla-Parra S (2020) Quantitative FRET-FLIM-BlaM to assess the extent of HIV-1 fusion in live cells. Viruses 12(2):206. https://doi.org/10.3390/v12020206
Chabbert B, Terryn C, Herbaut M, Vaidya A, Habrant A, Paës G, Donaldson L (2018) Fluorescence techniques can reveal cell wall organization and predict saccharification in pretreated wood biomass. Ind Crops Prod 123:84–92. https://doi.org/10.1016/j.indcrop.2018.06.058
Chang C-W (2013) Dexter Energy Transfer. Chemistry LibreTexts [online]. https://chem.libretexts.org/Bookshelves/Physical_and_Theoretical_Chemistry_Textbook_Maps/Supplemental_Modules_(Physical_and_Theoretical_Chemistry)/Fundamentals/Dexter_Energy_Transfer
Chen W, Avezov E, Schlachter SC, Gielen F, Laine RF, Harding HP, Hollfelder F, Ron D, Kaminski CF (2015) A method to quantify FRET stoichiometry with phasor plot analysis and acceptor lifetime ingrowth. Biophys J 108(5):999–1002. https://doi.org/10.1016/j.bpj.2015.01.012
Chen Z, Chen L, Khoo KS, Gupta VK, Sharma M, Show PL, Yap P-S (2023) Exploitation of lignocellulosic-based biomass biorefinery: a critical review of renewable bioresource, sustainability and economic views. Biotechnol Adv 69:108265. https://doi.org/10.1016/j.biotechadv.2023.108265
Chen Z, Li J, Wang B-C, Tian L (2025) In vivo two-photon FLIM resolves photosynthetic properties of maize bundle sheath cells. Photosynth Res 163(1):11. https://doi.org/10.1007/s11120-024-01135-0
Clegg RM (2009) Chapter 1 Förster resonance energy transfer—FRET what is it, why do it, and how it’s done. In: Laboratory Techniques in Biochemistry and Molecular Biology [online]. Elsevier. 1–57. Fret and Flim Techniques. https://www.sciencedirect.com/science/article/pii/S0075753508000016
Coletta VC, Rezende CA, DA Conceicao FR, Polikarpov I, Gontijo Guimaraes FE (2013) Mapping the lignin distribution in pretreated sugarcane bagasse by confocal and fluorescence lifetime imaging microscopy. Biotechnol Biofuels 6:43. https://doi.org/10.1186/1754-6834-6-43
Cravcenco A, Ye C, Gräfenstein J, Börjesson K (2020) Interplay between Förster and dexter energy transfer rates in isomeric donor-bridge-acceptor systems. J Phys Chem A 124(36):7219–7227. https://doi.org/10.1021/acs.jpca.0c05035
Dal Fovo A, Cicchi R, Gagliardi C, Baria E, Fioravanti M, Fontana R (2024) Detecting early degradation of wood ultrastructure with nonlinear optical imaging and fluorescence lifetime analysis. Polymers 16(24):3590. https://doi.org/10.3390/polym16243590
Datta R, Heaster TM, Sharick JT, Gillette AA, Skala MC (2020) Fluorescence lifetime imaging microscopy: fundamentals and advances in instrumentation, analysis, and applications. J Biomed Opt 25(7):071203. https://doi.org/10.1117/1.JBO.25.7.071203
De Los Santos C, Chang C-W, Mycek M-A, Cardullo RA (2015) FRAP, FLIM, and FRET: Detection and analysis of cellular dynamics on a molecular scale using fluorescence microscopy. Mol Reprod Dev 82(7‑8):587–604. https://doi.org/10.1002/mrd.22501
Demchenko AP (2024) Excitonic properties of organic dye aggregates: contribution of Ukrainian science. Chem Rec 24(2):e202300290. https://doi.org/10.1002/tcr.202300290
Devree BT, Steiner LM, Głazowska S, Ruhnow F, Herburger K, Persson S, Mravec J (2021) Current and future advances in fluorescence-based visualization of plant cell wall components and cell wall biosynthetic machineries. Biotechnol Biofuels 14(1):78. https://doi.org/10.1186/s13068-021-01922-0
Donaldson L (2020) Autofluorescence in Plants. Molecules 25(10):2393. https://doi.org/10.3390/molecules25102393
Donaldson LA (2022) Super-resolution imaging of Douglas fir xylem cell wall nanostructure using SRRF microscopy. Plant Methods 18(1):27. https://doi.org/10.1186/s13007-022-00865-3
Donaldson L, Radotic K (2013) Fluorescence lifetime imaging of lignin autofluorescence in normal and compression wood. J Microsc 251(2):178–187. https://doi.org/10.1111/jmi.12059
Donaldson LA, Newman RH, Vaidya A (2014) Nanoscale interactions of polyethylene glycol with thermo-mechanically pre-treated Pinus radiata biofuel substrate. Biotechnol Bioeng 111(4):719–725. https://doi.org/10.1002/bit.25138
Doukas AG, Junnarkar MR, Alfano RR, Callender RH, Kakitani T, Honig B (1984) Fluorescence quantum yield of visual pigments: evidence for subpicosecond isomerization rates. Proc Natl Acad Sci 81(15):4790–4794. https://doi.org/10.1073/pnas.81.15.4790
Elgass K, Caesar K, Wanke D, Harter K, Meixner AJ, Schleifenbaum F (2010) Application of FLIM-FIDSAM for the in vivo analysis of hormone competence of different cell types. Anal Bioanal Chem 398(5):1919–1925. https://doi.org/10.1007/s00216-010-4127-4
Escamez S, Terryn C, Gandla ML, Yassin Z, Scheepers G, Näsholm T, Sundman O, Jönsson LJ, Lundberg-Felten J, Tuominen H, Niittylä T, Paës G (2021) Fluorescence lifetime imaging as an in situ and label-free readout for the chemical composition of Lignin. ACS Sustain Chem Eng 9(51):17381–17392. https://doi.org/10.1021/acssuschemeng.1c06780
Feofilova EP, Mysyakina IS (2016) Lignin: chemical structure, biodegradation, and practical application (a review). Appl Biochem Microbiol 52(6):573–581. https://doi.org/10.1134/S0003683816060053
Comments (0)