Combining single-cell analysis and Mendelian randomization to elucidate the molecular mechanisms of fibronectin-related genes in multiple sclerosis

ANOVA

analysis of variance

CD3ζ

T cell receptor T3 zeta chain

CNS

central nervous system

DEGs

differentially expressed genes

EAE

experimental autoimmune encephalomyelitis

FRGs

fibronectin-related genes

GAPDH

Glyceraldehyde phosphate dehydrogenase

GEO

Gene Expression Omnibus

GSEA

gene set enrichment analysis

GWAS

genome-wide association study

IEU

Integrative Epidemiology Unit

ILT

immunoglobulin-like transcript

IRF1

interferon regulatory factor-1

IVs

instrumental variables

IVW

inverse variance weighted

KEAP

Kelch-like ECH-associated protein

KEGG

Kyoto Encyclopedia of Genes and Genomes

LILRB

leukocyte immunoglobulin-like receptor subfamily B

MR

Mendelian randomization

NCRs

natural cytotoxicity receptors

NFE2L

nuclear factor erythroid 2-related factor

NKG2D

natural killer group 2 member D

OPCs

oligodendrocyte precursor cells

PCA

Principal component analysis

RCTs

randomized controlled trials

RhoA

ras homolog gene family member A

ROCK1

Rho associated coiled-coil containing protein kinase 1

ROS

reactive oxygen species

RRMS

relapsing-remitting multiple sclerosis

RT-qPCR

reverse transcription-quantitative polymerase chain reaction

scRNA-Seq

Single-cell RNA sequencing

SLE

systemic lupus erythematosus

SNPs

single-nucleotide polymorphisms

STAT1

signal transducer and activator of transcription 1

STIM

stromal interaction molecule

sTNFRs

soluble TNF receptors

TNF-α

tumor necrosis factor-α

t-SNE

t-distributed stochastic neighbor embedding

VEGF

vascular endothelial growth factor

ZAP

zeta-chain-associated protein kinase

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