Allelic diversity and selection at the MHC class I and class II in a long-distance migratory shorebird, the Hudsonian Godwit ()

Alcaide M (2010) On the relative roles of selection and genetic drift in shaping MHC variation. Mol Ecol 19:3842–3844. https://doi.org/10.1111/j.1365-294X.2010.04772.x

Article  PubMed  Google Scholar 

Alcaide M, Liu M, Edwards SV (2013) Major histocompatibility complex class I evolution in songbirds: universal primers, rapid evolution and base compositional shifts in exon 3 PeerJ, 2013. 11–22. https://doi.org/10.7717/peerj.86

Altizer S, Bartel R, Han BA (2011) Animal migration and infectious disease risk. Science 331:296–302. https://doi.org/10.1126/science.1194694

Article  CAS  PubMed  Google Scholar 

Bernatchez L, Landry C (2003) MHC studies in nonmodel vertebrates: what have we learned about natural selection in 15 years? J Evol Biol 16:363–377. https://doi.org/10.1046/j.1420-9101.2003.00531.x

Article  CAS  PubMed  Google Scholar 

Biedrzycka A, O’Connor E, Sebastian A, Migalska M, Radwan J, Zając T, Bielański W, Solarz W, Ćmiel A, Westerdahl H (2017) Extreme MHC class I diversity in the sedge warbler (Acrocephalus schoenobaenus); selection patterns and allelic divergence suggest that different genes have different functions. BMC Evol Biol. https://doi.org/10.1186/s12862-017-0997-9

Article  PubMed  PubMed Central  Google Scholar 

Bjorkman PJ, Saper MA, Samraoui B, Bennett WS, Strominger JL, Wiley DC (1987) Structure of the human class I histocompatibility antigen, HLA-A2. Nature 329:506–512. https://doi.org/10.1038/329506a0

Article  CAS  PubMed  Google Scholar 

Bonneaud C, Pérez-Tris J, Federici P, Chastel O, Sorci G (2006) Major histocompatibility alleles associated with local resistance to malaria in a passerine. Evolution 60:383. https://doi.org/10.1554/05-409.1

Article  CAS  PubMed  Google Scholar 

Borg ÅA, Pedersen SA, Jensen H, Westerdahl H (2011) Variation in MHC genotypes in two populations of house sparrow (Passer domesticus) with different population histories. Ecol Evol 1:145–159. https://doi.org/10.1002/ece3.13

Article  PubMed  PubMed Central  Google Scholar 

Brown JH, Jardetzky TS, Gorga JC, Stern LJ, Urban RG, Strominger JL, Wiley DC (1993) Three-dimensional structure of the human class II histocompatibility antigen HLA-DR1 Nature 364:33–39. https://doi.org/10.1038/364033a0

Buehler DM, Verkuil YI, Tavares ES, Baker AJ (2013) Characterization of MHC class I in a long-distance migrant shorebird suggests multiple transcribed genes and intergenic recombination. Immunogenetics 65:211–225. https://doi.org/10.1007/s00251-012-0669-2

Article  CAS  PubMed  Google Scholar 

Christie K, Wilson RE, Johnson JA, Friis C, Harwood CM, McDuffie LA, Nol E, Sonsthagen SA (2023) Movement and genomic methods reveal mechanisms promoting connectivity in a declining shorebird: the lesser yellowlegs. Diversity 15:595. https://doi.org/10.3390/d15050595

Article  CAS  Google Scholar 

Clark NJ, Clegg SM, Klaassen M (2016) Migration strategy and pathogen risk: non-breeding distribution drives malaria prevalence in migratory waders. Oikos 125:1358–1368. https://doi.org/10.1111/oik.03220

Article  Google Scholar 

Cloutier A, Mills JA, Baker AJ (2011) Characterization and locus-specific typing of MHC class I genes in the red-billed gull (Larus scopulinus) provides evidence for major, minor, and nonclassical loci. Immunogenetics 63:377–394. https://doi.org/10.1007/s00251-011-0516-x

Article  CAS  PubMed  Google Scholar 

Conklin JR, Reneerkens J, Verkuil YI, Tomkovich PS, Palsbøll PJ, Piersma T (2016) Low genetic differentiation between Greenlandic and Siberian Sanderling populations implies a different phylogeographic history than found in Red Knots. J Ornithol 157:325–332. https://doi.org/10.1007/s10336-015-1284-4

Article  Google Scholar 

Cruz-López M, Fernández G, Hipperson H et al (2020) Allelic diversity and patterns of selection at the major histocompatibility complex class I and II loci in a threatened shorebird, the Snowy Plover (Charadrius nivosus). https://doi.org/10.1186/s12862-020-01676-7. BMC Evolutionary Biology

D’Urban Jackson J, Bruford MW, Székely T et al (2020) Population differentiation and historical demography of the threatened snowy plover Charadrius nivosus (Cassin, 1858). Conserv Genet 21:387–404. https://doi.org/10.1007/s10592-020-01256-8

Article  CAS  Google Scholar 

Dionne M (2009) Pathogens as potential selective agents in the wild. Mol Ecol 18:4523–4525. https://doi.org/10.1111/j.1365-294X.2009.04375.x

Article  PubMed  Google Scholar 

Dubiec A, Atamas N, Ledwoń M (2023) Very low prevalence of haemosporidian parasites in two species of marsh terns. Parasitol Res 122:3063–3075. https://doi.org/10.1007/s00436-023-07997-y

Article  PubMed  PubMed Central  Google Scholar 

Ekblom R, Sæther SA, Jacobsson P, Fiske P, Sahlman T, Grahn M, Kålås JA, Höglund J (2007) Spatial pattern of MHC class II variation in the great snipe (Gallinago media). Mol Ecol 16:1439–1451. https://doi.org/10.1111/j.1365-294X.2007.03281.x

Article  PubMed  Google Scholar 

Excoffier L, Lischer HEL (2010) Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows. Mol Ecol Resour 10:564–567. https://doi.org/10.1111/j.1755-0998.2010.02847.x

Article  PubMed  Google Scholar 

Faria F, Aldabe J, De Almeida JB et al (2025) Population estimates of shorebirds on the Atlantic Coast of southern South America generated from large-scale, simultaneous, volunteer-led surveys. J Field Ornithol. https://doi.org/10.5751/jfo-00584-960102

Article  Google Scholar 

Fattorini N, Costanzo A, Romano A, Rubolini D, Baillie S, Bairlein F, Spina F, Ambrosini R (2023) Eco-evolutionary drivers of avian migratory connectivity. Ecol Lett 26:1095–1107. https://doi.org/10.1111/ele.14223

Article  PubMed  Google Scholar 

Finch T, Butler SJ, Franco AMA, Cresswell W (2017) Low migratory connectivity is common in long-distance migrant birds. J Anim Ecol 86:662–673. https://doi.org/10.1111/1365-2656.12635

Article  PubMed  Google Scholar 

Funk WC, Mullins TD, Haig SM (2007) Conservation genetics of snowy plovers (Charadrius alexandrinus) in the Western Hemisphere: population genetic structure and delineation of subspecies. Conserv Genet 8:1287–1309. https://doi.org/10.1007/s10592-006-9278-7

Article  Google Scholar 

Geraghty DE, Daza R, Williams LM, Vu Q, Ishitani A (2002) Genetics of the immune response: identifying immune variation within the MHC and throughout the genome. Immunol Rev 190:69–85

Article  CAS  PubMed  Google Scholar 

Gillingham MaF, Béchet A, Courtiol A, Rendón-Martos M, Amat JA, Samraoui B, Onmuş O, Sommer S, Cézilly F (2017) Very high MHC Class IIB diversity without spatial differentiation in the mediterranean population of greater Flamingos. https://doi.org/10.1186/s12862-017-0905-3. BMC Evolutionary Biology

Guernier V, Hochberg ME, Guégan J-F (2004) Ecology drives the worldwide distribution of human diseases. PLoS Biol 2:e141. https://doi.org/10.1371/journal.pbio.0020141

Article  CAS  PubMed  PubMed Central  Google Scholar 

Guglielmo CG (2010) Move that fatty acid: fuel selection and transport in migratory birds and bats. Integr Comp Biol 50:336–345. https://doi.org/10.1093/icb/icq097

Article  PubMed  Google Scholar 

Habarugira G, Suen WW, Hobson-Peters J, Hall RA, Bielefeldt-Ohmann H (2020) West Nile Virus: An update on pathobiology, epidemiology, diagnostics, control and One Health implications. Pathogens 9:589. https://doi.org/10.3390/pathogens9070589

Article  CAS  PubMed  PubMed Central  Google Scholar 

Haig SM, Gratto-Trevor CL, Mullins TD, Colwell MA (1997) Population identification of western hemisphere shorebirds throughout the annual cycle. Mol Ecol 6:413–427. https://doi.org/10.1046/j.1365-294X.1997.t01-1-00203.x

Article  CAS  Google Scholar 

Hanson BA, Luttrell MP, Goekjian VH, Niles L, Swayne DE, Senne DA, Stallknecht DE (2008) Is the occurrence of avian influenza virus in charadriiformes species and location dependent? J Wildl Dis 44:351–361. https://doi.org/10.7589/0090-3558-44.2.351

Article  CAS  PubMed  Google Scholar 

Hughes AL, Nei M (1988a) Pattern of nucleotide substitution at major histocompatibility complex class I loci reveals overdominant selection. Nature 335:167–170

Article  CAS  PubMed  Google Scholar 

Hughes AL, Nei M (1988b) Pattern of nucleotide substitution at major histocompatibility complex class I loci reveals overdominant selection. Nature 335:167–170. https://doi.org/10.1038/335167a0

Article  CAS  PubMed  Google Scholar 

Comments (0)

No login
gif