Andrejewski N, Punnonen EL, Guhde G, Tanaka Y, Lullmann-Rauch R, Hartmann D, von Figura K, Saftig P (1999) Normal lysosomal morphology and function in LAMP-1-deficient mice. J Biol Chem 274:12692–12701

Article  CAS  PubMed  Google Scholar 

Babuta M, Furi I, Bala S, Bukong TN, Lowe P, Catalano D, Calenda C, Kodys K, Szabo G (2019) Dysregulated autophagy and lysosome function are linked to exosome production by micro-RNA 155 in alcoholic liver disease. Hepatology 70:2123–2141

Article  CAS  PubMed  PubMed Central  Google Scholar 

Birmingham CL, Smith AC, Bakowski MA, Yoshimori T, Brumell JH (2006) Autophagy controls Salmonella infection in response to damage to the Salmonella-containing vacuole. J Biol Chem 281:11374–11383

Article  CAS  PubMed  Google Scholar 

Biswas N, Liu S, Ronni T, Aussenberg SE, Liu W, Fujita T, Wang T (2011) The ubiquitin-like protein PLIC-1 or ubiquilin 1 inhibits TLR3-Trif signaling. PLoS ONE 6:e21153

Article  CAS  PubMed  PubMed Central  Google Scholar 

Cong Y, Dinesh Kumar N, Mauthe M, Verlhac P, Reggiori F (2020) Manipulation of selective macroautophagy by pathogens at a glance. J Cell Sci 133

Dice JF (2007) Chaperone-mediated autophagy. Autophagy 3:295–299

Article  CAS  PubMed  Google Scholar 

Drecktrah D, Knodler LA, Howe D, Steele-Mortimer O (2007) Salmonella trafficking is defined by continuous dynamic interactions with the endolysosomal system. Traffic 8:212–225

Article  CAS  PubMed  PubMed Central  Google Scholar 

Eskelinen EL (2006) Roles of LAMP-1 and LAMP-2 in lysosome biogenesis and autophagy. Mol Aspects Med 27:495–502

Article  CAS  PubMed  Google Scholar 

Guha M, Mackman N (2002) The phosphatidylinositol 3-kinase-Akt pathway limits lipopolysaccharide activation of signaling pathways and expression of inflammatory mediators in human monocytic cells. J Biol Chem 277:32124–32132

Article  CAS  PubMed  Google Scholar 

Jo EK, Yuk JM, Shin DM, Sasakawa C (2013) Roles of autophagy in elimination of intracellular bacterial pathogens. Front Immunol 4:97

Article  PubMed  PubMed Central  Google Scholar 

Kaushik S, Massey AC, Mizushima N, Cuervo AM (2008) Constitutive activation of chaperone-mediated autophagy in cells with impaired macroautophagy. Mol Biol Cell 19:2179–2192

Article  CAS  PubMed  PubMed Central  Google Scholar 

Kirkin V, Lamark T, Johansen T, Dikic I (2009) NBR1 cooperates with p62 in selective autophagy of ubiquitinated targets. Autophagy 5:732–733

Article  CAS  PubMed  Google Scholar 

Kleijnen MF, Shih AH, Zhou P, Kumar S, Soccio RE, Kedersha NL, Gill G, Howley PM (2000) The hPLIC proteins may provide a link between the ubiquitination machinery and the proteasome. Mol Cell 6:409–419

Article  CAS  PubMed  Google Scholar 

Ko HS, Uehara T, Tsuruma K, Nomura Y (2004) Ubiquilin interacts with ubiquitylated proteins and proteasome through its ubiquitin-associated and ubiquitin-like domains. FEBS Lett 566:110–114

Article  PubMed  Google Scholar 

Konecki DS, Foetisch K, Zimmer KP, Schlotter M, Lichter-Konecki U (1995) An alternatively spliced form of the human lysosome-associated membrane protein-2 gene is expressed in a tissue-specific manner. Biochem Biophys Res Commun 215:757–767

Article  CAS  PubMed  Google Scholar 

Korac J, Schaeffer V, Kovacevic I, Clement AM, Jungblut B, Behl C, Terzic J, Dikic I (2013) Ubiquitin-independent function of optineurin in autophagic clearance of protein aggregates. J Cell Sci 126:580–592

Article  CAS  PubMed  Google Scholar 

Kurlawala Z, Shah PP, Shah C, Beverly LJ (2017) The STI and UBA domains of UBQLN1 are critical determinants of substrate interaction and proteostasis. J Cell Biochem 118:2261–2270

Article  CAS  PubMed  PubMed Central  Google Scholar 

Lahiri A, Eswarappa SM, Das P, Chakravortty D (2010) Altering the balance between pathogen containing vacuoles and lysosomes: a lesson from. Salmonella Virulence 1:325–329

Article  PubMed  Google Scholar 

Lee DY, Brown EJ (2012) Ubiquilins in the crosstalk among proteolytic pathways. Biol Chem 393:441–447

Article  CAS  PubMed  Google Scholar 

Lee DY, Arnott D, Brown EJ (2013a) Ubiquilin4 is an adaptor protein that recruits Ubiquilin1 to the autophagy machinery. EMBO Rep 14:373–381

Article  CAS  PubMed  PubMed Central  Google Scholar 

Lee JE, Jeon IS, Han NE, Song HJ, Kim EG, Choi JW, Song KD, Lee HK, Choi JK (2013b) Ubiquilin 1 interacts with Orai1 to regulate calcium mobilization. Mol Cells 35:41–46

Article  CAS  PubMed  PubMed Central  Google Scholar 

Lee EJ, Park KS, Jeon IS, Choi JW, Lee SJ, Choy HE, Song KD, Lee HK, Choi JK (2016) LAMP-3 (Lysosome-Associated Membrane Protein 3) Promotes the Intracellular Proliferation of Salmonella typhimurium. Mol Cells 39:566–572

Article  CAS  PubMed  PubMed Central  Google Scholar 

Levine B, Yuan J (2005) Autophagy in cell death: an innocent convict? J Clin Invest 115:2679–2688

Article  CAS  PubMed  PubMed Central  Google Scholar 

Mah AL, Perry G, Smith MA, Monteiro MJ (2000) Identification of ubiquilin, a novel presenilin interactor that increases presenilin protein accumulation. J Cell Biol 151:847–862

Article  CAS  PubMed  PubMed Central  Google Scholar 

Maiuri MC, Zalckvar E, Kimchi A, Kroemer G (2007) Self-eating and self-killing: crosstalk between autophagy and apoptosis. Nat Rev Mol Cell Biol 8:741–752

Article  CAS  PubMed  Google Scholar 

Mostowy S, Sancho-Shimizu V, Hamon MA, Simeone R, Brosch R, Johansen T, Cossart P (2011) p62 and NDP52 proteins target intracytosolic Shigella and Listeria to different autophagy pathways. J Biol Chem 286:26987–26995

Article  CAS  PubMed  PubMed Central  Google Scholar 

N’Diaye EN, Kajihara KK, Hsieh I, Morisaki H, Debnath J, Brown EJ (2009) PLIC proteins or ubiquilins regulate autophagy-dependent cell survival during nutrient starvation. EMBO Rep 10:173–179

Article  PubMed  PubMed Central  Google Scholar 

Park KS, Jeon IS, Hong JT, Yang B, Choi JK (2025) Regulation of intracellular proliferation of Salmonella typhimurium by CD63. Genes Genomics 47:973–982

Article  CAS  PubMed  Google Scholar 

Raasi S, Varadan R, Fushman D, Pickart CM (2005) Diverse polyubiquitin interaction properties of ubiquitin-associated domains. Nat Struct Mol Biol 12:708–714

Article  CAS  PubMed  Google Scholar 

Roark EA, Haldar K (2008) Effects of lysosomal membrane protein depletion on the Salmonella-containing vacuole. PLoS ONE 3:e3538

Article  PubMed  PubMed Central  Google Scholar 

Rothenberg C, Srinivasan D, Mah L, Kaushik S, Peterhoff CM, Ugolino J, Fang S, Cuervo AM, Nixon RA, Monteiro MJ (2010) Ubiquilin functions in autophagy and is degraded by chaperone-mediated autophagy. Hum Mol Genet 19:3219–3232

Article  CAS  PubMed